Discoveries
Metabolism
Metabolism
We are working to understand human metabolism and what happens when this biological system breaks down. The problem is more important than ever, given the increasing burden that diabetes and other metabolic dysfunctions have on human health and society.

Salk Professor Reuben Shaw’s lab revealed how a cellular “fuel gauge” responsible for managing energy processes—a protein complex called AMPK—has an unexpected role in development. The work was published March 2016 in Genes & Development.

Shaw, first author Nathan Young and colleagues discovered that embryonic stem cells without a functioning AMPK pathway don’t execute the development process properly, creating more of one germ layer than another. This lapse turns out to be due to a loss of lysosomes, structures responsible for degrading and reusing cellular components. By turning on lysosomal genes, the team was able to restore normal development in the AMPK-deficient cells.

According to Shaw, the connection between AMPK and lysosomes reveals more about cellular growth and metabolism.

Currently, lysosome inhibitors are in dozens of clinical trials for certain cancers, even though the exact link between lysosomes and tumors is not understood. “We are decoding underlying connections that might indicate when and how cancer drugs might be useful,” says Shaw. “This work may help us make better, more specific ways of targeting lysosomes in cancer.”

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